Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID |
| Phenotype | phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID |
| Upregulated in class | SCID |
| GeneSet | BIOCARTA_HIV-1 NEF: NEGATIVE EFFECTOR OF FAS AND TNF |
| Enrichment Score (ES) | -0.52100813 |
| Normalized Enrichment Score (NES) | -1.7831159 |
| Nominal p-value | 0.0 |
| FDR q-value | 0.36560157 |
| FWER p-Value | 0.714 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | CYCS | 1422484_at 1445484_at | 587 | 2.631 | 0.0186 | No | ||
| 2 | CHUK | 1417091_at 1428210_s_at 1451383_a_at | 1170 | 1.823 | 0.0235 | No | ||
| 3 | MAP2K7 | 1421416_at 1425393_a_at 1425512_at 1425513_at 1440442_at 1451736_a_at 1457182_at | 1386 | 1.693 | 0.0429 | No | ||
| 4 | MAP3K14 | 1422999_at 1434364_at | 1607 | 1.556 | 0.0597 | No | ||
| 5 | PAK2 | 1434250_at 1454887_at | 2172 | 1.283 | 0.0560 | No | ||
| 6 | GSN | 1415812_at 1436991_x_at 1437171_x_at 1441225_at 1456312_x_at 1456568_at 1456569_x_at | 3485 | 0.925 | 0.0121 | No | ||
| 7 | MDM2 | 1423605_a_at 1427718_a_at 1457929_at | 3752 | 0.867 | 0.0149 | No | ||
| 8 | CRADD | 1427505_a_at 1443430_at | 3924 | 0.833 | 0.0214 | No | ||
| 9 | LMNA | 1421654_a_at 1425472_a_at 1426868_x_at 1452212_at 1457670_s_at | 3954 | 0.827 | 0.0344 | No | ||
| 10 | CDC2L1 | 1418841_s_at | 6131 | 0.484 | -0.0567 | No | ||
| 11 | APAF1 | 1450223_at | 6539 | 0.437 | -0.0677 | No | ||
| 12 | NFKBIA | 1420088_at 1420089_at 1438157_s_at 1448306_at 1449731_s_at | 6670 | 0.421 | -0.0664 | No | ||
| 13 | DAXX | 1419026_at | 8064 | 0.280 | -0.1252 | No | ||
| 14 | BCL2 | 1422938_at 1427818_at 1437122_at 1440770_at 1443837_x_at 1457687_at | 9591 | 0.137 | -0.1926 | No | ||
| 15 | RB1 | 1417850_at 1441494_at 1444400_at 1444454_at 1457447_at | 10060 | 0.097 | -0.2123 | No | ||
| 16 | BIRC2 | 1418854_at | 11288 | -0.008 | -0.2682 | No | ||
| 17 | PSEN2 | 1425869_a_at 1431542_at | 11382 | -0.017 | -0.2722 | No | ||
| 18 | PARP1 | 1422502_at 1422503_s_at 1435368_a_at 1443573_at | 11562 | -0.034 | -0.2798 | No | ||
| 19 | BAG4 | 1418707_at 1439024_at 1449186_at | 11993 | -0.072 | -0.2982 | No | ||
| 20 | RASA1 | 1426476_at 1426477_at 1426478_at 1438998_at | 12131 | -0.084 | -0.3030 | No | ||
| 21 | BIRC3 | 1421392_a_at 1425223_at | 12726 | -0.137 | -0.3278 | No | ||
| 22 | TNF | 1419607_at | 13820 | -0.238 | -0.3736 | No | ||
| 23 | PRKDC | 1451576_at | 14589 | -0.317 | -0.4032 | No | ||
| 24 | CFLAR | 1424996_at 1425686_at 1425687_at 1439600_at 1449317_at | 14731 | -0.332 | -0.4040 | No | ||
| 25 | FASLG | 1418803_a_at 1449235_at | 14775 | -0.338 | -0.4001 | No | ||
| 26 | FAS | 1460251_at | 15007 | -0.363 | -0.4044 | No | ||
| 27 | BID | 1417045_at 1447873_x_at 1448560_at | 15017 | -0.364 | -0.3985 | No | ||
| 28 | DFFB | 1421229_at 1437051_at | 15174 | -0.382 | -0.3990 | No | ||
| 29 | LMNB1 | 1423520_at 1423521_at | 15294 | -0.394 | -0.3977 | No | ||
| 30 | RIPK1 | 1419508_at 1439273_at 1449485_at | 15871 | -0.462 | -0.4160 | No | ||
| 31 | TRAF1 | 1423602_at 1445452_at | 16705 | -0.577 | -0.4441 | No | ||
| 32 | CASP8 | 1424552_at | 16947 | -0.612 | -0.4446 | No | ||
| 33 | LMNB2 | 1451849_a_at | 18468 | -0.911 | -0.4983 | No | ||
| 34 | PTK2 | 1423059_at 1430827_a_at 1439198_at 1440082_at 1441475_at 1443384_at 1445137_at | 18966 | -1.010 | -0.5036 | Yes | ||
| 35 | FADD | 1416888_at 1446499_at | 19092 | -1.031 | -0.4915 | Yes | ||
| 36 | PSEN1 | 1420261_at 1421853_at 1425549_at 1450399_at | 19295 | -1.077 | -0.4821 | Yes | ||
| 37 | MAPK8 | 1420931_at 1420932_at 1437045_at 1440856_at 1457936_at | 19611 | -1.168 | -0.4764 | Yes | ||
| 38 | MAP3K1 | 1424850_at | 19820 | -1.242 | -0.4644 | Yes | ||
| 39 | RELA | 1419536_a_at | 19848 | -1.253 | -0.4441 | Yes | ||
| 40 | CASP3 | 1426165_a_at 1430192_at 1449839_at | 19993 | -1.310 | -0.4280 | Yes | ||
| 41 | ARHGDIB | 1426454_at | 20525 | -1.576 | -0.4251 | Yes | ||
| 42 | TRAF2 | 1451233_at | 20609 | -1.634 | -0.4007 | Yes | ||
| 43 | CASP6 | 1415995_at 1458715_at | 20811 | -1.766 | -0.3794 | Yes | ||
| 44 | CASP9 | 1426125_a_at 1437537_at 1457816_at | 20906 | -1.849 | -0.3518 | Yes | ||
| 45 | DFFA | 1450885_at 1457564_at | 21032 | -1.942 | -0.3240 | Yes | ||
| 46 | CASP2 | 1448165_at | 21150 | -2.026 | -0.2944 | Yes | ||
| 47 | NUMA1 | 1423974_at 1423975_s_at 1441090_at 1444576_at 1444577_x_at | 21167 | -2.038 | -0.2599 | Yes | ||
| 48 | TRADD | 1429117_at 1439910_a_at 1452622_a_at | 21619 | -2.690 | -0.2341 | Yes | ||
| 49 | TNFRSF1A | 1417291_at | 21718 | -3.039 | -0.1862 | Yes | ||
| 50 | CASP7 | 1426062_a_at 1448659_at | 21858 | -4.665 | -0.1120 | Yes | ||
| 51 | PRKCD | 1422847_a_at 1442256_at | 21900 | -6.694 | 0.0016 | Yes |
